J3_9O2Y_035
3D structure
- PDB id
- 9O2Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (R) beta-2-hydroxy-BocLysine acid charged NH-tRNAPyl
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.14 Å
Loop
- Sequence
- GCCGUAG*CGC*GGAAC
- Length
- 15 nucleotides
- Bulged bases
- 9O2Y|1|b|U|14, 9O2Y|1|b|A|108
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9O2Y|1|b|G|10
9O2Y|1|b|C|11
9O2Y|1|b|C|12
9O2Y|1|b|G|13
9O2Y|1|b|U|14
9O2Y|1|b|A|15
9O2Y|1|b|G|16
*
9O2Y|1|b|C|68
9O2Y|1|b|G|69
9O2Y|1|b|C|70
*
9O2Y|1|b|G|106
9O2Y|1|b|G|107
9O2Y|1|b|A|108
9O2Y|1|b|A|109
9O2Y|1|b|C|110
Current chains
- Chain b
- 5S rRNA
Nearby chains
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
- Chain n
- Large ribosomal subunit protein uL18
- Chain u
- Large ribosomal subunit protein bL25
- Chain v
- Large ribosomal subunit protein bL27
Coloring options: