J3_9O3I_032

3D structure

PDB id

9O3I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with ketolide telithromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.80A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGAAC*GGUGCC*GGAGCC

Length

17 nucleotides

Bulged bases

9O3I|1|1a|G|1003

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3I|1|1a|G|1002
9O3I|1|1a|G|1003
9O3I|1|1a|A|1004
9O3I|1|1a|A|1005
9O3I|1|1a|C|1006
*
9O3I|1|1a|G|1023
9O3I|1|1a|G|1024
9O3I|1|1a|U|1025
9O3I|1|1a|G|1026
9O3I|1|1a|C|1027
9O3I|1|1a|C|1028
*
9O3I|1|1a|G|1033
9O3I|1|1a|G|1034
9O3I|1|1a|A|1035
9O3I|1|1a|G|1036
9O3I|1|1a|C|1037
9O3I|1|1a|C|1038

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains