3D structure

PDB id
9OLF (explore in PDB, NAKB, or RNA 3D Hub)
Description
Membrane-associated human mitoribosome in complex with TACO1
Experimental method
ELECTRON MICROSCOPY
Resolution
2.46 Å

Loop

Sequence
CCAAACCCACUCCACCUUACUACCAGACAACCUUAGCCA*UUACCCAAAUA*UUGAAACCUG
Length
60 nucleotides
Bulged bases
9OLF|1|A|C|1699, 9OLF|1|A|U|1701, 9OLF|1|A|C|1707, 9OLF|1|A|A|1708, 9OLF|1|A|C|1715, 9OLF|1|A|U|1716, 9OLF|1|A|A|1735, 9OLF|1|A|C|1764
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9OLF|1|A|C|1684
9OLF|1|A|C|1685
9OLF|1|A|A|1686
9OLF|1|A|A|1687
9OLF|1|A|A|1688
9OLF|1|A|C|1689
9OLF|1|A|C|1690
9OLF|1|A|C|1691
9OLF|1|A|A|1692
9OLF|1|A|C|1693
9OLF|1|A|U|1694
9OLF|1|A|C|1695
9OLF|1|A|C|1696
9OLF|1|A|A|1697
9OLF|1|A|C|1698
9OLF|1|A|C|1699
9OLF|1|A|U|1700
9OLF|1|A|U|1701
9OLF|1|A|A|1702
9OLF|1|A|C|1703
9OLF|1|A|U|1704
9OLF|1|A|A|1705
9OLF|1|A|C|1706
9OLF|1|A|C|1707
9OLF|1|A|A|1708
9OLF|1|A|G|1709
9OLF|1|A|A|1710
9OLF|1|A|C|1711
9OLF|1|A|A|1712
9OLF|1|A|A|1713
9OLF|1|A|C|1714
9OLF|1|A|C|1715
9OLF|1|A|U|1716
9OLF|1|A|U|1717
9OLF|1|A|A|1718
9OLF|1|A|G|1719
9OLF|1|A|C|1720
9OLF|1|A|C|1721
9OLF|1|A|A|1722
*
9OLF|1|A|U|1729
9OLF|1|A|U|1730
9OLF|1|A|A|1731
9OLF|1|A|C|1732
9OLF|1|A|C|1733
9OLF|1|A|C|1734
9OLF|1|A|A|1735
9OLF|1|A|A|1736
9OLF|1|A|A|1737
9OLF|1|A|U|1738
9OLF|1|A|A|1739
*
9OLF|1|A|U|1758
9OLF|1|A|U|1759
9OLF|1|A|G|1760
9OLF|1|A|A|1761
9OLF|1|A|A|1762
9OLF|1|A|A|1763
9OLF|1|A|C|1764
9OLF|1|A|C|1765
9OLF|1|A|U|1766
9OLF|1|A|G|1767

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain 2
39S ribosomal protein L34, mitochondrial
Chain 3
39S ribosomal protein L35, mitochondrial
Chain 5
39S ribosomal protein L37, mitochondrial
Chain 9
39S ribosomal protein L41, mitochondrial
Chain F
39S ribosomal protein L4, mitochondrial
Chain H
39S ribosomal protein L9, mitochondrial
Chain M
39S ribosomal protein L15, mitochondrial
Chain OX
Mitochondrial inner membrane protein OXA1L
Chain U
39S ribosomal protein L23, mitochondrial
Chain V
39S ribosomal protein L24, mitochondrial
Chain X
39S ribosomal protein L28, mitochondrial
Chain Y
39S ribosomal protein L47, mitochondrial
Chain i
39S ribosomal protein L51, mitochondrial
Chain q
Growth arrest and DNA damage-inducible proteins-interacting protein 1

Coloring options:

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