J3_9OLF_014

3D structure

PDB id

9OLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Membrane-associated human mitoribosome in complex with TACO1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.46 Å

Loop

Sequence

AGGA*UAC*GGAU

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_9OLF_014 not in the Motif Atlas

Homologous match to J3_6CZR_019

Geometric discrepancy: 0.1645

The information below is about J3_6CZR_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9OLF|1|AA|A|1198
9OLF|1|AA|G|1199
9OLF|1|AA|G|1200
9OLF|1|AA|A|1201
*
9OLF|1|AA|U|1364
9OLF|1|AA|A|1365
9OLF|1|AA|C|1366
*
9OLF|1|AA|G|1421
9OLF|1|AA|G|1422
9OLF|1|AA|A|1423
9OLF|1|AA|U|1424

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AF

28S ribosomal protein S7, mitochondrial

Chain AG

28S ribosomal protein S9, mitochondrial

Chain Ax

P/P-tRNA

Chain Ay

Transfer RNA; tRNA