J3_9OWQ_001
3D structure
- PDB id
- 9OWQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Geobacillus stearothermophilus RNase P ribozyme in complex with precursor tRNA with loop-back 5' leader
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CGG*CG*UACAGAACAUGGCUUAUAG
- Length
- 24 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9OWQ_001 not in the Motif Atlas
- Homologous match to J3_2A64_003
- Geometric discrepancy: 0.1638
- The information below is about J3_2A64_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_82932.1
- Basepair signature
- cWW-F-F-cWW-cSS-cSS-cWW-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
9OWQ|1|A|C|13
9OWQ|1|A|G|14
9OWQ|1|A|G|15
*
9OWQ|1|A|C|344
9OWQ|1|A|G|345
*
9OWQ|1|A|U|384
9OWQ|1|A|A|385
9OWQ|1|A|C|386
9OWQ|1|A|A|387
9OWQ|1|A|G|388
9OWQ|1|A|A|389
9OWQ|1|A|A|390
9OWQ|1|A|C|391
9OWQ|1|A|A|392
9OWQ|1|A|U|393
9OWQ|1|A|G|394
9OWQ|1|A|G|395
9OWQ|1|A|C|396
9OWQ|1|A|U|397
9OWQ|1|A|U|398
9OWQ|1|A|A|399
9OWQ|1|A|U|400
9OWQ|1|A|A|401
9OWQ|1|A|G|402
Current chains
- Chain A
- RNase P RNA (417-MER)
Nearby chains
- Chain C
- Transfer RNA; tRNA
Coloring options: