J3_9P7H_004

3D structure

PDB id

9P7H (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ HHT and CHX treated human eEF1A-A/T-P state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.68 Å

Loop

Sequence

UUGAAAAGAAC*GAGUUCAAGAGGGCG*CA

Length

28 nucleotides

Bulged bases

9P7H|1|L5|G|409, 9P7H|1|L5|G|413

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P7H|1|L5|U|380
9P7H|1|L5|U|381
9P7H|1|L5|G|382
9P7H|1|L5|A|383
9P7H|1|L5|A|384
9P7H|1|L5|A|385
9P7H|1|L5|A|386
9P7H|1|L5|G|387
9P7H|1|L5|A|388
9P7H|1|L5|A|389
9P7H|1|L5|C|390
*
9P7H|1|L5|G|401
9P7H|1|L5|A|402
9P7H|1|L5|G|403
9P7H|1|L5|U|404
9P7H|1|L5|U|405
9P7H|1|L5|C|406
9P7H|1|L5|A|407
9P7H|1|L5|A|408
9P7H|1|L5|G|409
9P7H|1|L5|A|410
9P7H|1|L5|G|411
9P7H|1|L5|G|412
9P7H|1|L5|G|413
9P7H|1|L5|C|414
9P7H|1|L5|G|415
*
9P7H|1|L8|C|19
9P7H|1|L8|A|20

Current chains

Chain L5

28S rRNA [Homo sapiens]

Chain L8

5.8S rRNA [Homo sapiens]

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LP

60S ribosomal protein L17

Chain LY

60S ribosomal protein L26

Chain Ll

60S ribosomal protein L39