J3_9P8H_024
3D structure
- PDB id
- 9P8H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human A/P-P/E state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.98 Å
Loop
- Sequence
- UAUC*GU(PSU)*ACUAAUA
- Length
- 14 nucleotides
- Bulged bases
- 9P8H|1|L5|A|4464, 9P8H|1|L5|U|4465
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9P8H|1|L5|U|4463
9P8H|1|L5|A|4464
9P8H|1|L5|U|4465
9P8H|1|L5|C|4466
*
9P8H|1|L5|G|4491
9P8H|1|L5|U|4492
9P8H|1|L5|PSU|4493
*
9P8H|1|L5|A|4507
9P8H|1|L5|C|4508
9P8H|1|L5|U|4509
9P8H|1|L5|A|4510
9P8H|1|L5|A|4511
9P8H|1|L5|U|4512
9P8H|1|L5|A|4513
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LB
- Large ribosomal subunit protein uL3
- Chain LO
- 60S ribosomal protein L13a
- Chain LV
- 60S ribosomal protein L23
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