J3_9PGF_002
3D structure
- PDB id
- 9PGF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the P state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- CCAAACCCACUCCACCUUACUACCAGACAACCUUAGCCA*UUACCCAAAUAAAGUAU*AGAAAUUGAAACCUG
- Length
- 71 nucleotides
- Bulged bases
- 9PGF|1|A|C|1699, 9PGF|1|A|U|1701, 9PGF|1|A|C|1707, 9PGF|1|A|A|1708, 9PGF|1|A|C|1715, 9PGF|1|A|U|1716, 9PGF|1|A|A|1735, 9PGF|1|A|C|1764
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PGF|1|A|C|1684
9PGF|1|A|C|1685
9PGF|1|A|A|1686
9PGF|1|A|A|1687
9PGF|1|A|A|1688
9PGF|1|A|C|1689
9PGF|1|A|C|1690
9PGF|1|A|C|1691
9PGF|1|A|A|1692
9PGF|1|A|C|1693
9PGF|1|A|U|1694
9PGF|1|A|C|1695
9PGF|1|A|C|1696
9PGF|1|A|A|1697
9PGF|1|A|C|1698
9PGF|1|A|C|1699
9PGF|1|A|U|1700
9PGF|1|A|U|1701
9PGF|1|A|A|1702
9PGF|1|A|C|1703
9PGF|1|A|U|1704
9PGF|1|A|A|1705
9PGF|1|A|C|1706
9PGF|1|A|C|1707
9PGF|1|A|A|1708
9PGF|1|A|G|1709
9PGF|1|A|A|1710
9PGF|1|A|C|1711
9PGF|1|A|A|1712
9PGF|1|A|A|1713
9PGF|1|A|C|1714
9PGF|1|A|C|1715
9PGF|1|A|U|1716
9PGF|1|A|U|1717
9PGF|1|A|A|1718
9PGF|1|A|G|1719
9PGF|1|A|C|1720
9PGF|1|A|C|1721
9PGF|1|A|A|1722
*
9PGF|1|A|U|1729
9PGF|1|A|U|1730
9PGF|1|A|A|1731
9PGF|1|A|C|1732
9PGF|1|A|C|1733
9PGF|1|A|C|1734
9PGF|1|A|A|1735
9PGF|1|A|A|1736
9PGF|1|A|A|1737
9PGF|1|A|U|1738
9PGF|1|A|A|1739
9PGF|1|A|A|1740
9PGF|1|A|A|1741
9PGF|1|A|G|1742
9PGF|1|A|U|1743
9PGF|1|A|A|1744
9PGF|1|A|U|1745
*
9PGF|1|A|A|1753
9PGF|1|A|G|1754
9PGF|1|A|A|1755
9PGF|1|A|A|1756
9PGF|1|A|A|1757
9PGF|1|A|U|1758
9PGF|1|A|U|1759
9PGF|1|A|G|1760
9PGF|1|A|A|1761
9PGF|1|A|A|1762
9PGF|1|A|A|1763
9PGF|1|A|C|1764
9PGF|1|A|C|1765
9PGF|1|A|U|1766
9PGF|1|A|G|1767
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain 5
- 39S ribosomal protein L37, mitochondrial
- Chain 9
- 39S ribosomal protein L41, mitochondrial
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain H
- 39S ribosomal protein L9, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain OX
- Mitochondrial inner membrane protein OXA1L
- Chain U
- 39S ribosomal protein L23, mitochondrial
- Chain V
- 39S ribosomal protein L24, mitochondrial
- Chain X
- 39S ribosomal protein L28, mitochondrial
- Chain Y
- 39S ribosomal protein L47, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
- Chain q
- Growth arrest and DNA damage-inducible proteins-interacting protein 1
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