J3_9PGF_013

3D structure

PDB id

9PGF (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the P state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

CUC*GCAGUAA*UGAACAG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PGF|1|AA|C|1192
9PGF|1|AA|U|1193
9PGF|1|AA|C|1194
*
9PGF|1|AA|G|1428
9PGF|1|AA|C|1429
9PGF|1|AA|A|1430
9PGF|1|AA|G|1431
9PGF|1|AA|U|1432
9PGF|1|AA|A|1433
9PGF|1|AA|A|1434
*
9PGF|1|AA|U|1456
9PGF|1|AA|G|1457
9PGF|1|AA|A|1458
9PGF|1|AA|A|1459
9PGF|1|AA|C|1460
9PGF|1|AA|A|1461
9PGF|1|AA|G|1462

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A2

Small ribosomal subunit protein mS37

Chain AF

28S ribosomal protein S7, mitochondrial

Chain AG

28S ribosomal protein S9, mitochondrial