J3_9PGI_008
3D structure
- PDB id
- 9PGI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A-P-E state with TACO1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.02 Å
Loop
- Sequence
- GCA*UCAAUUGAUCC*GACCAAC
- Length
- 21 nucleotides
- Bulged bases
- 9PGI|1|A|U|2895, 9PGI|1|A|A|2914
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PGI|1|A|G|2846
9PGI|1|A|C|2847
9PGI|1|A|A|2848
*
9PGI|1|A|U|2890
9PGI|1|A|C|2891
9PGI|1|A|A|2892
9PGI|1|A|A|2893
9PGI|1|A|U|2894
9PGI|1|A|U|2895
9PGI|1|A|G|2896
9PGI|1|A|A|2897
9PGI|1|A|U|2898
9PGI|1|A|C|2899
9PGI|1|A|C|2900
*
9PGI|1|A|G|2909
9PGI|1|A|A|2910
9PGI|1|A|C|2911
9PGI|1|A|C|2912
9PGI|1|A|A|2913
9PGI|1|A|A|2914
9PGI|1|A|C|2915
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 1
- 39S ribosomal protein L33, mitochondrial
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain Ay
- Transfer RNA; tRNA
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain X
- 39S ribosomal protein L28, mitochondrial
Coloring options: