J3_9PGM_001
3D structure
- PDB id
- 9PGM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the P-E state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.18 Å
Loop
- Sequence
- CUAG*CAAUAGAUAUAGUAC*GGAAAG
- Length
- 25 nucleotides
- Bulged bases
- 9PGM|1|A|U|1774
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PGM|1|A|C|1678
9PGM|1|A|U|1679
9PGM|1|A|A|1680
9PGM|1|A|G|1681
*
9PGM|1|A|C|1771
9PGM|1|A|A|1772
9PGM|1|A|A|1773
9PGM|1|A|U|1774
9PGM|1|A|A|1775
9PGM|1|A|G|1776
9PGM|1|A|A|1777
9PGM|1|A|U|1778
9PGM|1|A|A|1779
9PGM|1|A|U|1780
9PGM|1|A|A|1781
9PGM|1|A|G|1782
9PGM|1|A|U|1783
9PGM|1|A|A|1784
9PGM|1|A|C|1785
*
9PGM|1|A|G|1792
9PGM|1|A|G|1793
9PGM|1|A|A|1794
9PGM|1|A|A|1795
9PGM|1|A|A|1796
9PGM|1|A|G|1797
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain 9
- 39S ribosomal protein L41, mitochondrial
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain R
- 39S ribosomal protein L20, mitochondrial
- Chain U
- 39S ribosomal protein L23, mitochondrial
- Chain V
- 39S ribosomal protein L24, mitochondrial
- Chain Y
- 39S ribosomal protein L47, mitochondrial
- Chain c
- 39S ribosomal protein L44, mitochondrial
- Chain d
- 39S ribosomal protein L45, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
- Chain n
- Nascent polypeptide
Coloring options: