J3_9PJ9_023

3D structure

PDB id

9PJ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

C. acnes 70S ribosome bound to Minocycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UGUGGUUCU*AGGAUUGGCCAGUGAGAAAUG*CUGGUGUG

Length

38 nucleotides

Bulged bases

9PJ9|1|a|C|358, 9PJ9|1|a|A|366

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PJ9|1|a|U|333
9PJ9|1|a|G|334
9PJ9|1|a|U|335
9PJ9|1|a|G|336
9PJ9|1|a|G|337
9PJ9|1|a|U|338
9PJ9|1|a|U|339
9PJ9|1|a|C|340
9PJ9|1|a|U|341
*
9PJ9|1|a|A|350
9PJ9|1|a|G|351
9PJ9|1|a|G|352
9PJ9|1|a|A|353
9PJ9|1|a|U|354
9PJ9|1|a|U|355
9PJ9|1|a|G|356
9PJ9|1|a|G|357
9PJ9|1|a|C|358
9PJ9|1|a|C|359
9PJ9|1|a|A|360
9PJ9|1|a|G|361
9PJ9|1|a|U|362
9PJ9|1|a|G|363
9PJ9|1|a|A|364
9PJ9|1|a|G|365
9PJ9|1|a|A|366
9PJ9|1|a|A|367
9PJ9|1|a|A|368
9PJ9|1|a|U|369
9PJ9|1|a|G|370
*
9PJ9|1|a|C|441
9PJ9|1|a|U|442
9PJ9|1|a|G|443
9PJ9|1|a|G|444
9PJ9|1|a|U|445
9PJ9|1|a|G|446
9PJ9|1|a|U|447
9PJ9|1|a|G|448

Current chains

Chain a

23S rRNA

Nearby chains