J3_9PJ9_027

3D structure

PDB id

9PJ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

C. acnes 70S ribosome bound to Minocycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GGA*UUGAAAGAGUG*CUCAC

Length

19 nucleotides

Bulged bases

9PJ9|1|a|A|1171

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PJ9|1|a|G|1138
9PJ9|1|a|G|1139
9PJ9|1|a|A|1140
*
9PJ9|1|a|U|1164
9PJ9|1|a|U|1165
9PJ9|1|a|G|1166
9PJ9|1|a|A|1167
9PJ9|1|a|A|1168
9PJ9|1|a|A|1169
9PJ9|1|a|G|1170
9PJ9|1|a|A|1171
9PJ9|1|a|G|1172
9PJ9|1|a|U|1173
9PJ9|1|a|G|1174
*
9PJ9|1|a|C|1183
9PJ9|1|a|U|1184
9PJ9|1|a|C|1185
9PJ9|1|a|A|1186
9PJ9|1|a|C|1187

Current chains

Chain a

23S rRNA

Nearby chains

Chain 3

50S ribosomal protein L36