J3_9PN5_034
3D structure
- PDB id
- 9PN5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Composite map of hypomethylated 80S ribosome treated with hygromycin B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.75 Å
Loop
- Sequence
- CUA*UUACG*CAAAG
- Length
- 13 nucleotides
- Bulged bases
- 9PN5|1|B5|A|1093
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PN5|1|B5|C|1037
9PN5|1|B5|U|1038
9PN5|1|B5|A|1039
*
9PN5|1|B5|U|1079
9PN5|1|B5|U|1080
9PN5|1|B5|A|1081
9PN5|1|B5|C|1082
9PN5|1|B5|G|1083
*
9PN5|1|B5|C|1090
9PN5|1|B5|A|1091
9PN5|1|B5|A|1092
9PN5|1|B5|A|1093
9PN5|1|B5|G|1094
Current chains
- Chain B5
- 18S rRNA
Nearby chains
- Chain BA
- Small ribosomal subunit protein uS2A
- Chain BV
- Small ribosomal subunit protein eS21A
- Chain BW
- Small ribosomal subunit protein uS8A
- Chain Ba
- Small ribosomal subunit protein eS26B
- Chain Bb
- Small ribosomal subunit protein eS27A
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