J3_9PRA_005
3D structure
- PDB id
- 9PRA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In Situ Structure of the Human Mitoribosome Large Subunit 39S in Complex with EF-Tu
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.83 Å
Loop
- Sequence
- AAAAUUUAACACCCAU*AUUAAG*CAACACCCACUACCUAAAAAAUCCCAAACAUAUAACU
- Length
- 59 nucleotides
- Bulged bases
- 9PRA|1|A|A|2154, 9PRA|1|A|U|2158, 9PRA|1|A|U|2159, 9PRA|1|A|C|2219, 9PRA|1|A|C|2221, 9PRA|1|A|C|2224, 9PRA|1|A|C|2225, 9PRA|1|A|U|2226, 9PRA|1|A|U|2233, 9PRA|1|A|C|2234, 9PRA|1|A|A|2241, 9PRA|1|A|U|2242, 9PRA|1|A|A|2243, 9PRA|1|A|U|2244
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PRA|1|A|A|2153
9PRA|1|A|A|2154
9PRA|1|A|A|2155
9PRA|1|A|A|2156
9PRA|1|A|U|2157
9PRA|1|A|U|2158
9PRA|1|A|U|2159
9PRA|1|A|A|2160
9PRA|1|A|A|2161
9PRA|1|A|C|2162
9PRA|1|A|A|2163
9PRA|1|A|C|2164
9PRA|1|A|C|2165
9PRA|1|A|C|2166
9PRA|1|A|A|2167
9PRA|1|A|U|2168
*
9PRA|1|A|A|2192
9PRA|1|A|U|2193
9PRA|1|A|U|2194
9PRA|1|A|A|2195
9PRA|1|A|A|2196
9PRA|1|A|G|2197
*
9PRA|1|A|C|2212
9PRA|1|A|A|2213
9PRA|1|A|A|2214
9PRA|1|A|C|2215
9PRA|1|A|A|2216
9PRA|1|A|C|2217
9PRA|1|A|C|2218
9PRA|1|A|C|2219
9PRA|1|A|A|2220
9PRA|1|A|C|2221
9PRA|1|A|U|2222
9PRA|1|A|A|2223
9PRA|1|A|C|2224
9PRA|1|A|C|2225
9PRA|1|A|U|2226
9PRA|1|A|A|2227
9PRA|1|A|A|2228
9PRA|1|A|A|2229
9PRA|1|A|A|2230
9PRA|1|A|A|2231
9PRA|1|A|A|2232
9PRA|1|A|U|2233
9PRA|1|A|C|2234
9PRA|1|A|C|2235
9PRA|1|A|C|2236
9PRA|1|A|A|2237
9PRA|1|A|A|2238
9PRA|1|A|A|2239
9PRA|1|A|C|2240
9PRA|1|A|A|2241
9PRA|1|A|U|2242
9PRA|1|A|A|2243
9PRA|1|A|U|2244
9PRA|1|A|A|2245
9PRA|1|A|A|2246
9PRA|1|A|C|2247
9PRA|1|A|U|2248
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 4
- 39S ribosomal protein L36, mitochondrial
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain I
- 39S ribosomal protein L10, mitochondrial
- Chain J
- 39S ribosomal protein L11, mitochondrial
- Chain K
- Large ribosomal subunit protein uL13m
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain R
- 39S ribosomal protein L20, mitochondrial
- Chain S
- 39S ribosomal protein L21, mitochondrial
- Chain j
- 39S ribosomal protein L52, mitochondrial
- Chain k
- Large ribosomal subunit protein mL53
- Chain l
- 39S ribosomal protein L54, mitochondrial
- Chain o
- Ribosomal protein 63, mitochondrial
- Chain r
- 39S ribosomal protein S18a, mitochondrial
Coloring options: