J3_9PRD_010

3D structure

PDB id

9PRD (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the P state from TACO1-knockout cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.31 Å

Loop

Sequence

CUCU*ACCCCAG*CAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PRD|1|AA|C|677
9PRD|1|AA|U|678
9PRD|1|AA|C|679
9PRD|1|AA|U|680
*
9PRD|1|AA|A|866
9PRD|1|AA|C|867
9PRD|1|AA|C|868
9PRD|1|AA|C|869
9PRD|1|AA|C|870
9PRD|1|AA|A|871
9PRD|1|AA|G|872
*
9PRD|1|AA|C|917
9PRD|1|AA|A|918
9PRD|1|AA|A|919
9PRD|1|AA|G|920

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AJ

28S ribosomal protein S12, mitochondrial

Chain AO

28S ribosomal protein S18b, mitochondrial