J3_9PRQ_014

3D structure

PDB id

9PRQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of human mitoribosome in the A/T-P state from TACO1-knockout cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

UGUAAUC*GAUCAACCUCAC*GCAA

Length

23 nucleotides

Bulged bases

9PRQ|1|AA|U|1229, 9PRQ|1|AA|C|1230, 9PRQ|1|AA|A|1232

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PRQ|1|AA|U|1210
9PRQ|1|AA|G|1211
9PRQ|1|AA|U|1212
9PRQ|1|AA|A|1213
9PRQ|1|AA|A|1214
9PRQ|1|AA|U|1215
9PRQ|1|AA|C|1216
*
9PRQ|1|AA|G|1227
9PRQ|1|AA|A|1228
9PRQ|1|AA|U|1229
9PRQ|1|AA|C|1230
9PRQ|1|AA|A|1231
9PRQ|1|AA|A|1232
9PRQ|1|AA|C|1233
9PRQ|1|AA|C|1234
9PRQ|1|AA|U|1235
9PRQ|1|AA|C|1236
9PRQ|1|AA|A|1237
9PRQ|1|AA|C|1238
*
9PRQ|1|AA|G|1351
9PRQ|1|AA|C|1352
9PRQ|1|AA|A|1353
9PRQ|1|AA|A|1354

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain 8

39S ribosomal protein L40, mitochondrial

Chain AH

28S ribosomal protein S10, mitochondrial

Chain AK

28S ribosomal protein S14, mitochondrial