J3_9PS7_011

3D structure

PDB id

9PS7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A/T-P-E state from TACO1-knockout cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

GAUU*AUUAACCU*AGC

Length

15 nucleotides

Bulged bases

9PS7|1|AA|A|688

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PS7|1|AA|G|687
9PS7|1|AA|A|688
9PS7|1|AA|U|689
9PS7|1|AA|U|690
*
9PS7|1|AA|A|823
9PS7|1|AA|U|824
9PS7|1|AA|U|825
9PS7|1|AA|A|826
9PS7|1|AA|A|827
9PS7|1|AA|C|828
9PS7|1|AA|C|829
9PS7|1|AA|U|830
*
9PS7|1|AA|A|856
9PS7|1|AA|G|857
9PS7|1|AA|C|858

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AJ

28S ribosomal protein S12, mitochondrial

Chain AM

28S ribosomal protein S16, mitochondrial

Chain AT

28S ribosomal protein S25, mitochondrial

Chain Ag

Elongation factor Tu, mitochondrial