J3_9PSI_010

3D structure

PDB id

9PSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A-P-E state from TACO1-knockout cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.12 Å

Loop

Sequence

CUCU*ACCCCAG*CAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PSI|1|AA|C|677
9PSI|1|AA|U|678
9PSI|1|AA|C|679
9PSI|1|AA|U|680
*
9PSI|1|AA|A|866
9PSI|1|AA|C|867
9PSI|1|AA|C|868
9PSI|1|AA|C|869
9PSI|1|AA|C|870
9PSI|1|AA|A|871
9PSI|1|AA|G|872
*
9PSI|1|AA|C|917
9PSI|1|AA|A|918
9PSI|1|AA|A|919
9PSI|1|AA|G|920

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AJ

28S ribosomal protein S12, mitochondrial

Chain AO

28S ribosomal protein S18b, mitochondrial