J3_9PSI_012
3D structure
- PDB id
- 9PSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A-P-E state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.12 Å
Loop
- Sequence
- CU*AAUAGAC*GG
- Length
- 11 nucleotides
- Bulged bases
- 9PSI|1|AA|A|1019
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PSI|1|AA|C|973
9PSI|1|AA|U|974
*
9PSI|1|AA|A|1014
9PSI|1|AA|A|1015
9PSI|1|AA|U|1016
9PSI|1|AA|A|1017
9PSI|1|AA|G|1018
9PSI|1|AA|A|1019
9PSI|1|AA|C|1020
*
9PSI|1|AA|G|1030
9PSI|1|AA|G|1031
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain A2
- Small ribosomal subunit protein mS37
- Chain AE
- 28S ribosomal protein S6, mitochondrial
- Chain AI
- 28S ribosomal protein S11, mitochondrial
- Chain AP
- 28S ribosomal protein S18c, mitochondrial
- Chain AQ
- Small ribosomal subunit protein bS21m
Coloring options: