J3_9PSI_015
3D structure
- PDB id
- 9PSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A-P-E state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.12 Å
Loop
- Sequence
- UGUAAUC*GAUCAACCUCAC*GCAA
- Length
- 23 nucleotides
- Bulged bases
- 9PSI|1|AA|U|1229, 9PSI|1|AA|C|1230, 9PSI|1|AA|A|1231, 9PSI|1|AA|A|1232
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PSI|1|AA|U|1210
9PSI|1|AA|G|1211
9PSI|1|AA|U|1212
9PSI|1|AA|A|1213
9PSI|1|AA|A|1214
9PSI|1|AA|U|1215
9PSI|1|AA|C|1216
*
9PSI|1|AA|G|1227
9PSI|1|AA|A|1228
9PSI|1|AA|U|1229
9PSI|1|AA|C|1230
9PSI|1|AA|A|1231
9PSI|1|AA|A|1232
9PSI|1|AA|C|1233
9PSI|1|AA|C|1234
9PSI|1|AA|U|1235
9PSI|1|AA|C|1236
9PSI|1|AA|A|1237
9PSI|1|AA|C|1238
*
9PSI|1|AA|G|1351
9PSI|1|AA|C|1352
9PSI|1|AA|A|1353
9PSI|1|AA|A|1354
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain AH
- 28S ribosomal protein S10, mitochondrial
- Chain AK
- 28S ribosomal protein S14, mitochondrial
- Chain Aw
- A/A-tRNA
Coloring options: