J3_9PSM_011

3D structure

PDB id

9PSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A/P-P/E state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

GAUU*AUUAACCU*AGC

Length

15 nucleotides

Bulged bases

9PSM|1|AA|A|688, 9PSM|1|AA|C|828

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PSM|1|AA|G|687
9PSM|1|AA|A|688
9PSM|1|AA|U|689
9PSM|1|AA|U|690
*
9PSM|1|AA|A|823
9PSM|1|AA|U|824
9PSM|1|AA|U|825
9PSM|1|AA|A|826
9PSM|1|AA|A|827
9PSM|1|AA|C|828
9PSM|1|AA|C|829
9PSM|1|AA|U|830
*
9PSM|1|AA|A|856
9PSM|1|AA|G|857
9PSM|1|AA|C|858

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AJ

28S ribosomal protein S12, mitochondrial

Chain AM

28S ribosomal protein S16, mitochondrial

Chain AT

28S ribosomal protein S25, mitochondrial