J3_9PZG_017

3D structure

PDB id

9PZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial ribosomal 2'-O-methyltransferase RsmI in complex with the small ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

CAAUG*CGUAGUCC*GUCG

Length

17 nucleotides

Bulged bases

9PZG|1|A|U|1240

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PZG|1|A|C|1237
9PZG|1|A|A|1238
9PZG|1|A|A|1239
9PZG|1|A|U|1240
9PZG|1|A|G|1241
*
9PZG|1|A|C|1296
9PZG|1|A|G|1297
9PZG|1|A|U|1298
9PZG|1|A|A|1299
9PZG|1|A|G|1300
9PZG|1|A|U|1301
9PZG|1|A|C|1302
9PZG|1|A|C|1303
*
9PZG|1|A|G|1334
9PZG|1|A|U|1335
9PZG|1|A|C|1336
9PZG|1|A|G|1337

Current chains

Chain A

16S rRNA

Nearby chains

Chain G

Small ribosomal subunit protein uS7

Chain M

Small ribosomal subunit protein uS13