J3_9Q2M_005
3D structure
- PDB id
- 9Q2M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CAGUC*GUGCG*CGACG
- Length
- 15 nucleotides
- Bulged bases
- 9Q2M|1|5|C|704
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Q2M|1|5|C|451
9Q2M|1|5|A|452
9Q2M|1|5|G|453
9Q2M|1|5|U|454
9Q2M|1|5|C|455
*
9Q2M|1|5|G|701
9Q2M|1|5|U|702
9Q2M|1|5|G|703
9Q2M|1|5|C|704
9Q2M|1|5|G|705
*
9Q2M|1|5|C|1292
9Q2M|1|5|G|1293
9Q2M|1|5|A|1294
9Q2M|1|5|C|1295
9Q2M|1|5|G|1296
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain E
- 60S ribosomal protein L6
- Chain e
- Large ribosomal subunit protein eL32
- Chain f
- Large ribosomal subunit protein eL33
- Chain r
- 60S ribosomal protein L28
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