J3_9Q2M_024

3D structure

PDB id

9Q2M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AG*CGCAAAU*AGU

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q2M|1|9|A|40
9Q2M|1|9|G|41
*
9Q2M|1|9|C|405
9Q2M|1|9|G|406
9Q2M|1|9|C|407
9Q2M|1|9|A|408
9Q2M|1|9|A|409
9Q2M|1|9|A|410
9Q2M|1|9|U|411
*
9Q2M|1|9|A|436
9Q2M|1|9|G|437
9Q2M|1|9|U|438

Current chains

Chain 9

18S rRNA

Nearby chains

Chain EF

Elongation factor 2

Chain JJ

40S ribosomal protein S9

Chain XX

40S ribosomal protein S23