J3_9Q2M_037
3D structure
- PDB id
- 9Q2M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CUGGC*GGACAAG*CCCGAGAUUG
- Length
- 22 nucleotides
- Bulged bases
- 9Q2M|1|9|U|1483
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Q2M|1|9|C|1407
9Q2M|1|9|U|1408
9Q2M|1|9|G|1409
9Q2M|1|9|G|1410
9Q2M|1|9|C|1411
*
9Q2M|1|9|G|1456
9Q2M|1|9|G|1457
9Q2M|1|9|A|1458
9Q2M|1|9|C|1459
9Q2M|1|9|A|1460
9Q2M|1|9|A|1461
9Q2M|1|9|G|1462
*
9Q2M|1|9|C|1476
9Q2M|1|9|C|1477
9Q2M|1|9|C|1478
9Q2M|1|9|G|1479
9Q2M|1|9|A|1480
9Q2M|1|9|G|1481
9Q2M|1|9|A|1482
9Q2M|1|9|U|1483
9Q2M|1|9|U|1484
9Q2M|1|9|G|1485
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain DD
- 40S ribosomal protein S3
- Chain FF
- Small ribosomal subunit protein uS7
- Chain QQ
- Small ribosomal subunit protein uS9
- Chain RR
- 40S ribosomal protein S17
- Chain UU
- 40S ribosomal protein S20
- Chain cc
- 40S ribosomal protein S28
- Chain dd
- 40S ribosomal protein S29
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