J3_9Q3Q_007
3D structure
- PDB id
- 9Q3Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of translating Escherichia coli 70S ribosome bound to mRNA, P-site QKF-peptidyl-tRNAPhe, glycyl-tRNAGly in A/T conformation, EF-Tu-GDP, and bottromycin at 2.01A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.01 Å
Loop
- Sequence
- CAG*CGAAC*GAUG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9Q3Q_007 not in the Motif Atlas
- Homologous match to J3_8B0X_017
- Geometric discrepancy: 0.0448
- The information below is about J3_8B0X_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_69816.3
- Basepair signature
- cWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 11
Unit IDs
9Q3Q|1|A|C|698
9Q3Q|1|A|A|699
9Q3Q|1|A|G|700
*
9Q3Q|1|A|C|732
9Q3Q|1|A|G|733
9Q3Q|1|A|A|734
9Q3Q|1|A|A|735
9Q3Q|1|A|C|736
*
9Q3Q|1|A|G|760
9Q3Q|1|A|A|761
9Q3Q|1|A|U|762
9Q3Q|1|A|G|763
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
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