J3_9Q3Q_019
3D structure
- PDB id
- 9Q3Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of translating Escherichia coli 70S ribosome bound to mRNA, P-site QKF-peptidyl-tRNAPhe, glycyl-tRNAGly in A/T conformation, EF-Tu-GDP, and bottromycin at 2.01A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.01 Å
Loop
- Sequence
- GAAC*GUUGAU*AAUGAAC
- Length
- 17 nucleotides
- Bulged bases
- 9Q3Q|1|A|U|2833, 9Q3Q|1|A|A|2835
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9Q3Q_019 not in the Motif Atlas
- Homologous match to J3_8B0X_025
- Geometric discrepancy: 0.0376
- The information below is about J3_8B0X_025
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Q3Q|1|A|G|2812
9Q3Q|1|A|A|2813
9Q3Q|1|A|A|2814
9Q3Q|1|A|C|2815
*
9Q3Q|1|A|G|2831
9Q3Q|1|A|U|2832
9Q3Q|1|A|U|2833
9Q3Q|1|A|G|2834
9Q3Q|1|A|A|2835
9Q3Q|1|A|U|2836
*
9Q3Q|1|A|A|2882
9Q3Q|1|A|A|2883
9Q3Q|1|A|U|2884
9Q3Q|1|A|G|2885
9Q3Q|1|A|A|2886
9Q3Q|1|A|A|2887
9Q3Q|1|A|C|2888
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L32
- Chain D
- 50S ribosomal protein L3
- Chain P
- Large ribosomal subunit protein bL17
- Chain U
- Large ribosomal subunit protein uL22
Coloring options: