J3_9Q6T_045

3D structure

PDB id

9Q6T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tiamulin and protein Y at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

GGA*UUUAAAGAGUG*CUCAC

Length

19 nucleotides

Bulged bases

9Q6T|1|2A|U|1082, 9Q6T|1|2A|U|1083, 9Q6T|1|2A|A|1088

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q6T|1|2A|G|1055
9Q6T|1|2A|G|1056
9Q6T|1|2A|A|1057
*
9Q6T|1|2A|U|1081
9Q6T|1|2A|U|1082
9Q6T|1|2A|U|1083
9Q6T|1|2A|A|1084
9Q6T|1|2A|A|1085
9Q6T|1|2A|A|1086
9Q6T|1|2A|G|1087
9Q6T|1|2A|A|1088
9Q6T|1|2A|G|1089
9Q6T|1|2A|U|1090
9Q6T|1|2A|G|1091
*
9Q6T|1|2A|C|1100
9Q6T|1|2A|U|1101
9Q6T|1|2A|C|1102
9Q6T|1|2A|A|1103
9Q6T|1|2A|C|1104

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 29

50S ribosomal protein L36

Chain 2Q

50S ribosomal protein L16