J3_9Q7Q_024
3D structure
- PDB id
- 9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ABCE1-eRF1-RNC-AMD1C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- AC*GAGAAUU*ACACU
- Length
- 14 nucleotides
- Bulged bases
- 9Q7Q|1|8|A|62
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9Q7Q_024 not in the Motif Atlas
- Homologous match to J3_8GLP_039
- Geometric discrepancy: 0.124
- The information below is about J3_8GLP_039
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_01004.4
- Basepair signature
- cWW-cWW-F-F-F-cWW-F-cWW
- Number of instances in this motif group
- 12
Unit IDs
9Q7Q|1|8|A|44
9Q7Q|1|8|C|45
*
9Q7Q|1|8|G|58
9Q7Q|1|8|A|59
9Q7Q|1|8|G|60
9Q7Q|1|8|A|61
9Q7Q|1|8|A|62
9Q7Q|1|8|U|63
9Q7Q|1|8|U|64
*
9Q7Q|1|8|A|95
9Q7Q|1|8|C|96
9Q7Q|1|8|A|97
9Q7Q|1|8|C|98
9Q7Q|1|8|U|99
Current chains
- Chain 8
- 5.8S rRNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain X
- eL23
- Chain h
- eL35
- Chain j
- Ribosomal protein L37
- Chain l
- eL39
Coloring options: