J3_9Q7Q_029
3D structure
- PDB id
- 9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ABCE1-eRF1-RNC-AMD1C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- AGAG*CAG*CUGGAU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9Q7Q_029 not in the Motif Atlas
- Homologous match to J3_9H3G_032
- Geometric discrepancy: 0.2424
- The information below is about J3_9H3G_032
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_97642.5
- Basepair signature
- cWW-tSH-F-F-cWW-F-tWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
9Q7Q|1|K|A|816
9Q7Q|1|K|G|817
9Q7Q|1|K|A|818
9Q7Q|1|K|G|819
*
9Q7Q|1|K|C|829
9Q7Q|1|K|A|830
9Q7Q|1|K|G|831
*
9Q7Q|1|K|C|843
9Q7Q|1|K|U|844
9Q7Q|1|K|G|845
9Q7Q|1|K|G|846
9Q7Q|1|K|A|847
9Q7Q|1|K|U|848
Current chains
- Chain K
- 18S rRNA
Nearby chains
- Chain DD
- Ribosomal protein S9 (Predicted)
- Chain NN
- Small ribosomal subunit protein eS24
- Chain x
- Small ribosomal subunit protein eS4
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