J3_9Q87_025
3D structure
- PDB id
- 9Q87 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Principles of ion binding to RNA inferred from the analysis of a 1.55 Angstrom resolution bacterial ribosome structure - Part I: Mg2+
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.55 Å
Loop
- Sequence
- GGAUGUUG*CAUCAUUUAAAG*CAC
- Length
- 23 nucleotides
- Bulged bases
- 9Q87|1|a|U|1063
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Q87|1|a|G|1057
9Q87|1|a|G|1058
9Q87|1|a|A|1059
9Q87|1|a|U|1060
9Q87|1|a|G|1061
9Q87|1|a|U|1062
9Q87|1|a|U|1063
9Q87|1|a|G|1064
*
9Q87|1|a|C|1078
9Q87|1|a|A|1079
9Q87|1|a|U|1080
9Q87|1|a|C|1081
9Q87|1|a|A|1082
9Q87|1|a|U|1083
9Q87|1|a|U|1084
9Q87|1|a|U|1085
9Q87|1|a|A|1086
9Q87|1|a|A|1087
9Q87|1|a|A|1088
9Q87|1|a|G|1089
*
9Q87|1|a|C|1104
9Q87|1|a|A|1105
9Q87|1|a|C|1106
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein bL36
- Chain 5
- Large ribosomal subunit protein uL11
Coloring options: