J3_9QLO_006

3D structure

PDB id

9QLO (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

CAGUC*GUGCG*CGACG

Length

15 nucleotides

Bulged bases

9QLO|1|L5|C|704, 9QLO|1|L5|C|1295

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QLO|1|L5|C|451
9QLO|1|L5|A|452
9QLO|1|L5|G|453
9QLO|1|L5|U|454
9QLO|1|L5|C|455
*
9QLO|1|L5|G|701
9QLO|1|L5|U|702
9QLO|1|L5|G|703
9QLO|1|L5|C|704
9QLO|1|L5|G|705
*
9QLO|1|L5|C|1292
9QLO|1|L5|G|1293
9QLO|1|L5|A|1294
9QLO|1|L5|C|1295
9QLO|1|L5|G|1296

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

Large ribosomal subunit protein eL6

Chain Le

60S ribosomal protein L32

Chain Lf

60S ribosomal protein L35a