J3_9QLO_008

3D structure

PDB id

9QLO (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

UGAACUA*UAG*CGAA

Length

14 nucleotides

Bulged bases

9QLO|1|L5|A|1534, 9QLO|1|L5|G|1641, 9QLO|1|L5|A|1642

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QLO|1|L5|U|1531
9QLO|1|L5|G|1532
9QLO|1|L5|A|1533
9QLO|1|L5|A|1534
9QLO|1|L5|C|1535
9QLO|1|L5|U|1536
9QLO|1|L5|A|1537
*
9QLO|1|L5|U|1622
9QLO|1|L5|A|1623
9QLO|1|L5|G|1624
*
9QLO|1|L5|C|1640
9QLO|1|L5|G|1641
9QLO|1|L5|A|1642
9QLO|1|L5|A|1643

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LA

60S ribosomal protein L8

Chain LN

60S ribosomal protein L15

Chain Lj

Large ribosomal subunit protein eL37

Chain Ll

60S ribosomal protein L39