J3_9QLO_020

3D structure

PDB id

9QLO (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

GUC*GCCUCACGAUCC*GGUGUC

Length

21 nucleotides

Bulged bases

9QLO|1|L5|C|4337, 9QLO|1|L5|U|4374

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QLO|1|L5|G|4228
9QLO|1|L5|U|4229
9QLO|1|L5|C|4230
*
9QLO|1|L5|G|4331
9QLO|1|L5|C|4332
9QLO|1|L5|C|4333
9QLO|1|L5|U|4334
9QLO|1|L5|C|4335
9QLO|1|L5|A|4336
9QLO|1|L5|C|4337
9QLO|1|L5|G|4338
9QLO|1|L5|A|4339
9QLO|1|L5|U|4340
9QLO|1|L5|C|4341
9QLO|1|L5|C|4342
*
9QLO|1|L5|G|4370
9QLO|1|L5|G|4371
9QLO|1|L5|U|4372
9QLO|1|L5|G|4373
9QLO|1|L5|U|4374
9QLO|1|L5|C|4375

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LQ

60S ribosomal protein L18

Chain LT

60S ribosomal protein L21

Chain La

60S ribosomal protein L27a

Chain Lo

60S ribosomal protein L36a