J3_9QLP_002

3D structure

PDB id

9QLP (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - State 2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CAAG*CCCAGCCCGUGGAC*GGUAG

Length

23 nucleotides

Bulged bases

9QLP|1|L5|U|224

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QLP|1|L5|C|196
9QLP|1|L5|A|197
9QLP|1|L5|A|198
9QLP|1|L5|G|199
*
9QLP|1|L5|C|215
9QLP|1|L5|C|216
9QLP|1|L5|C|217
9QLP|1|L5|A|218
9QLP|1|L5|G|219
9QLP|1|L5|C|220
9QLP|1|L5|C|221
9QLP|1|L5|C|222
9QLP|1|L5|G|223
9QLP|1|L5|U|224
9QLP|1|L5|G|225
9QLP|1|L5|G|226
9QLP|1|L5|A|227
9QLP|1|L5|C|228
*
9QLP|1|L5|G|240
9QLP|1|L5|G|241
9QLP|1|L5|U|242
9QLP|1|L5|A|243
9QLP|1|L5|G|244

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LY

60S ribosomal protein L26