J3_9QLP_006

3D structure

PDB id

9QLP (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - State 2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CAGUC*GUGCG*CGACG

Length

15 nucleotides

Bulged bases

9QLP|1|L5|C|704, 9QLP|1|L5|C|1295

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QLP|1|L5|C|451
9QLP|1|L5|A|452
9QLP|1|L5|G|453
9QLP|1|L5|U|454
9QLP|1|L5|C|455
*
9QLP|1|L5|G|701
9QLP|1|L5|U|702
9QLP|1|L5|G|703
9QLP|1|L5|C|704
9QLP|1|L5|G|705
*
9QLP|1|L5|C|1292
9QLP|1|L5|G|1293
9QLP|1|L5|A|1294
9QLP|1|L5|C|1295
9QLP|1|L5|G|1296

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

Large ribosomal subunit protein eL6

Chain Le

60S ribosomal protein L32

Chain Lf

60S ribosomal protein L35a