J3_9QLP_020

3D structure

PDB id

9QLP (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - State 2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

GUC*GCCUCACGAUCC*GGUGUC

Length

21 nucleotides

Bulged bases

9QLP|1|L5|C|4337, 9QLP|1|L5|U|4374

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QLP|1|L5|G|4228
9QLP|1|L5|U|4229
9QLP|1|L5|C|4230
*
9QLP|1|L5|G|4331
9QLP|1|L5|C|4332
9QLP|1|L5|C|4333
9QLP|1|L5|U|4334
9QLP|1|L5|C|4335
9QLP|1|L5|A|4336
9QLP|1|L5|C|4337
9QLP|1|L5|G|4338
9QLP|1|L5|A|4339
9QLP|1|L5|U|4340
9QLP|1|L5|C|4341
9QLP|1|L5|C|4342
*
9QLP|1|L5|G|4370
9QLP|1|L5|G|4371
9QLP|1|L5|U|4372
9QLP|1|L5|G|4373
9QLP|1|L5|U|4374
9QLP|1|L5|C|4375

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LQ

60S ribosomal protein L18

Chain LT

60S ribosomal protein L21

Chain La

60S ribosomal protein L27a

Chain Lo

60S ribosomal protein L36a