J3_9QLQ_002

3D structure

PDB id

9QLQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - alternative State

Experimental method

ELECTRON MICROSCOPY

Resolution

2.57 Å

Loop

Sequence

CAAG*CCCAGCCCGUGGAC*GGUAG

Length

23 nucleotides

Bulged bases

9QLQ|1|L5|U|224

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QLQ|1|L5|C|196
9QLQ|1|L5|A|197
9QLQ|1|L5|A|198
9QLQ|1|L5|G|199
*
9QLQ|1|L5|C|215
9QLQ|1|L5|C|216
9QLQ|1|L5|C|217
9QLQ|1|L5|A|218
9QLQ|1|L5|G|219
9QLQ|1|L5|C|220
9QLQ|1|L5|C|221
9QLQ|1|L5|C|222
9QLQ|1|L5|G|223
9QLQ|1|L5|U|224
9QLQ|1|L5|G|225
9QLQ|1|L5|G|226
9QLQ|1|L5|A|227
9QLQ|1|L5|C|228
*
9QLQ|1|L5|G|240
9QLQ|1|L5|G|241
9QLQ|1|L5|U|242
9QLQ|1|L5|A|243
9QLQ|1|L5|G|244

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LY

60S ribosomal protein L26