J3_9QOH_002

3D structure

PDB id

9QOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CAAG*CCCAGCCCGUGGAC*GGUAG

Length

23 nucleotides

Bulged bases

9QOH|1|A2|U|224

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QOH|1|A2|C|196
9QOH|1|A2|A|197
9QOH|1|A2|A|198
9QOH|1|A2|G|199
*
9QOH|1|A2|C|215
9QOH|1|A2|C|216
9QOH|1|A2|C|217
9QOH|1|A2|A|218
9QOH|1|A2|G|219
9QOH|1|A2|C|220
9QOH|1|A2|C|221
9QOH|1|A2|C|222
9QOH|1|A2|G|223
9QOH|1|A2|U|224
9QOH|1|A2|G|225
9QOH|1|A2|G|226
9QOH|1|A2|A|227
9QOH|1|A2|C|228
*
9QOH|1|A2|G|240
9QOH|1|A2|G|241
9QOH|1|A2|U|242
9QOH|1|A2|A|243
9QOH|1|A2|G|244

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain F2

Large ribosomal subunit protein uL4

Chain S2

Large ribosomal subunit protein uL24