J3_9QOH_009

3D structure

PDB id

9QOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CAG*CG(PSU)AG*UCCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QOH|1|A2|C|1359
9QOH|1|A2|A|1360
9QOH|1|A2|G|1361
*
9QOH|1|A2|C|1393
9QOH|1|A2|G|1394
9QOH|1|A2|PSU|1395
9QOH|1|A2|A|1396
9QOH|1|A2|G|1397
*
9QOH|1|A2|U|1422
9QOH|1|A2|C|1423
9QOH|1|A2|C|1424
9QOH|1|A2|G|1425

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain D2

Large ribosomal subunit protein uL2

Chain L2

Large ribosomal subunit protein eL19

Chain a2

Large ribosomal subunit protein eL34

Chain j2

Large ribosomal subunit protein eL43