J3_9QOH_012

3D structure

PDB id

9QOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CGAAGUG*CAA*UCUG

Length

14 nucleotides

Bulged bases

9QOH|1|A2|A|2151, 9QOH|1|A2|U|2153

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QOH|1|A2|C|2148
9QOH|1|A2|G|2149
9QOH|1|A2|A|2150
9QOH|1|A2|A|2151
9QOH|1|A2|G|2152
9QOH|1|A2|U|2153
9QOH|1|A2|G|2154
*
9QOH|1|A2|C|2560
9QOH|1|A2|A|2561
9QOH|1|A2|A|2562
*
9QOH|1|A2|U|2574
9QOH|1|A2|C|2575
9QOH|1|A2|U|2576
9QOH|1|A2|G|2577

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain L2

Large ribosomal subunit protein eL19

Chain a2

Large ribosomal subunit protein eL34