J3_9QOH_015
3D structure
- PDB id
- 9QOH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome POST translocation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- AGAUGG*CGUUCCGAAGGG*CGGCCGA(PSU)
- Length
- 26 nucleotides
- Bulged bases
- 9QOH|1|A2|C|2225, 9QOH|1|A2|A|2227, 9QOH|1|A2|G|2230, 9QOH|1|A2|C|2259
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QOH|1|A2|A|2206
9QOH|1|A2|G|2207
9QOH|1|A2|A|2208
9QOH|1|A2|U|2209
9QOH|1|A2|G|2210
9QOH|1|A2|G|2211
*
9QOH|1|A2|C|2220
9QOH|1|A2|G|2221
9QOH|1|A2|U|2222
9QOH|1|A2|U|2223
9QOH|1|A2|C|2224
9QOH|1|A2|C|2225
9QOH|1|A2|G|2226
9QOH|1|A2|A|2227
9QOH|1|A2|A|2228
9QOH|1|A2|G|2229
9QOH|1|A2|G|2230
9QOH|1|A2|G|2231
*
9QOH|1|A2|C|2256
9QOH|1|A2|G|2257
9QOH|1|A2|G|2258
9QOH|1|A2|C|2259
9QOH|1|A2|C|2260
9QOH|1|A2|G|2261
9QOH|1|A2|A|2262
9QOH|1|A2|PSU|2263
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain B1
- Large ribosomal subunit protein eL8
- Chain C2
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain D2
- Large ribosomal subunit protein uL2
- Chain H1
- Large ribosomal subunit protein eL15
- Chain R2
- Large ribosomal subunit protein uL23
- Chain d2
- Large ribosomal subunit protein eL37
Coloring options: