J3_9QOH_022

3D structure

PDB id

9QOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CUC*GAG*CAAAAG

Length

12 nucleotides

Bulged bases

9QOH|1|A2|A|3932, 9QOH|1|A2|A|3934

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QOH|1|A2|C|3893
9QOH|1|A2|U|3894
9QOH|1|A2|C|3895
*
9QOH|1|A2|G|3919
9QOH|1|A2|A|3920
9QOH|1|A2|G|3921
*
9QOH|1|A2|C|3930
9QOH|1|A2|A|3931
9QOH|1|A2|A|3932
9QOH|1|A2|A|3933
9QOH|1|A2|A|3934
9QOH|1|A2|G|3935

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain B2

5S ribosomal RNA; 5S rRNA

Chain Bv

Transfer RNA; tRNA

Chain E1

Large ribosomal subunit protein uL5

Chain G2

Large ribosomal subunit protein uL18

Chain N2

Large ribosomal subunit protein eL21