J3_9QOH_035
3D structure
- PDB id
- 9QOH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome POST translocation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CCAG*CCAGUAA*UGAUU(A2M)AG
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QOH|1|m2|C|1220
9QOH|1|m2|C|1221
9QOH|1|m2|A|1222
9QOH|1|m2|G|1223
*
9QOH|1|m2|C|1647
9QOH|1|m2|C|1648
9QOH|1|m2|A|1649
9QOH|1|m2|G|1650
9QOH|1|m2|U|1651
9QOH|1|m2|A|1652
9QOH|1|m2|A|1653
*
9QOH|1|m2|U|1675
9QOH|1|m2|G|1676
9QOH|1|m2|A|1677
9QOH|1|m2|U|1678
9QOH|1|m2|U|1679
9QOH|1|m2|A2M|1680
9QOH|1|m2|A|1681
9QOH|1|m2|G|1682
Current chains
- Chain m2
- 18S ribosomal RNA
Nearby chains
- Chain G3
- Small ribosomal subunit protein eS28
- Chain n2
- Transfer RNA; tRNA
- Chain s2
- Small ribosomal subunit protein uS7
- Chain y2
- Small ribosomal subunit protein uS9
Coloring options: