J3_9QQP_003
3D structure
- PDB id
- 9QQP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome rotated-2 PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CGAUAGUCAACAAGUAC*GGAAAG*CUCG
- Length
- 27 nucleotides
- Bulged bases
- 9QQP|1|A2|U|354, 9QQP|1|A2|A|362, 9QQP|1|C2|C|23
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QQP|1|A2|C|351
9QQP|1|A2|G|352
9QQP|1|A2|A|353
9QQP|1|A2|U|354
9QQP|1|A2|A|355
9QQP|1|A2|G|356
9QQP|1|A2|U|357
9QQP|1|A2|C|358
9QQP|1|A2|A|359
9QQP|1|A2|A|360
9QQP|1|A2|C|361
9QQP|1|A2|A|362
9QQP|1|A2|A|363
9QQP|1|A2|G|364
9QQP|1|A2|U|365
9QQP|1|A2|A|366
9QQP|1|A2|C|367
*
9QQP|1|A2|G|374
9QQP|1|A2|G|375
9QQP|1|A2|A|376
9QQP|1|A2|A|377
9QQP|1|A2|A|378
9QQP|1|A2|G|379
*
9QQP|1|C2|C|21
9QQP|1|C2|U|22
9QQP|1|C2|C|23
9QQP|1|C2|G|24
Current chains
- Chain A2
- 28S ribosomal RNA
- Chain C2
- 5.8S ribosomal RNA
Nearby chains
- Chain By
- Nascent protein chain
- Chain F2
- Large ribosomal subunit protein uL4
- Chain S2
- Large ribosomal subunit protein uL24
- Chain d2
- Large ribosomal subunit protein eL37
- Chain f2
- Large ribosomal subunit protein eL39
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