J3_9QQP_020
3D structure
- PDB id
- 9QQP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome rotated-2 PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GGGGG*CGCUUCUGGCGCCAAG*CGAC
- Length
- 25 nucleotides
- Bulged bases
- 9QQP|1|A2|C|3766, 9QQP|1|A2|U|3767, 9QQP|1|A2|U|3768, 9QQP|1|A2|G|3771
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QQP|1|A2|G|3741
9QQP|1|A2|G|3742
9QQP|1|A2|G|3743
9QQP|1|A2|G|3744
9QQP|1|A2|G|3745
*
9QQP|1|A2|C|3764
9QQP|1|A2|G|3765
9QQP|1|A2|C|3766
9QQP|1|A2|U|3767
9QQP|1|A2|U|3768
9QQP|1|A2|C|3769
9QQP|1|A2|U|3770
9QQP|1|A2|G|3771
9QQP|1|A2|G|3772
9QQP|1|A2|C|3773
9QQP|1|A2|G|3774
9QQP|1|A2|C|3775
9QQP|1|A2|C|3776
9QQP|1|A2|A|3777
9QQP|1|A2|A|3778
9QQP|1|A2|G|3779
*
9QQP|1|A2|C|3807
9QQP|1|A2|G|3808
9QQP|1|A2|A|3809
9QQP|1|A2|C|3810
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain B1
- Large ribosomal subunit protein eL8
- Chain D2
- Large ribosomal subunit protein uL2
- Chain T2
- Large ribosomal subunit protein eL27
- Chain W2
- Large ribosomal subunit protein eL30
- Chain a2
- Large ribosomal subunit protein eL34
- Chain j2
- Large ribosomal subunit protein eL43
- Chain p2
- 40S ribosomal protein S3a
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