J3_9QQP_035
3D structure
- PDB id
- 9QQP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mouse Ribosome rotated-2 PRE state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- UGGA*UAC*GGAA
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QQP|1|m2|U|1227
9QQP|1|m2|G|1228
9QQP|1|m2|G|1229
9QQP|1|m2|A|1230
*
9QQP|1|m2|U|1532
9QQP|1|m2|A|1533
9QQP|1|m2|C|1534
*
9QQP|1|m2|G|1640
9QQP|1|m2|G|1641
9QQP|1|m2|A|1642
9QQP|1|m2|A|1643
Current chains
- Chain m2
- 18S ribosomal RNA
Nearby chains
- Chain A3
- Small ribosomal subunit protein uS13
- Chain B3
- 40S ribosomal protein S19 (eS19)
- Chain n2
- Transfer RNA; tRNA
- Chain s2
- Small ribosomal subunit protein uS7
- Chain y2
- Small ribosomal subunit protein uS9
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