J3_9QWT_001

3D structure

PDB id

9QWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAGCG*CGUACG*CCGG

Length

15 nucleotides

Bulged bases

9QWT|1|A2|C|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QWT|1|A2|C|112
9QWT|1|A2|A|113
9QWT|1|A2|G|114
9QWT|1|A2|C|115
9QWT|1|A2|G|116
*
9QWT|1|A2|C|155
9QWT|1|A2|G|156
9QWT|1|A2|U|157
9QWT|1|A2|A|158
9QWT|1|A2|C|159
9QWT|1|A2|G|160
*
9QWT|1|A2|C|275
9QWT|1|A2|C|276
9QWT|1|A2|G|277
9QWT|1|A2|G|278

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain B1

Large ribosomal subunit protein eL8

Chain F1

Large ribosomal subunit protein eL13

Chain H1

Large ribosomal subunit protein eL15

Chain b2

Large ribosomal subunit protein uL29

Chain c2

Large ribosomal subunit protein eL36