J3_9QWT_002

3D structure

PDB id

9QWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAAG*CCCAGCCCGUGGAC*GGUAG

Length

23 nucleotides

Bulged bases

9QWT|1|A2|U|224

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QWT|1|A2|C|196
9QWT|1|A2|A|197
9QWT|1|A2|A|198
9QWT|1|A2|G|199
*
9QWT|1|A2|C|215
9QWT|1|A2|C|216
9QWT|1|A2|C|217
9QWT|1|A2|A|218
9QWT|1|A2|G|219
9QWT|1|A2|C|220
9QWT|1|A2|C|221
9QWT|1|A2|C|222
9QWT|1|A2|G|223
9QWT|1|A2|U|224
9QWT|1|A2|G|225
9QWT|1|A2|G|226
9QWT|1|A2|A|227
9QWT|1|A2|C|228
*
9QWT|1|A2|G|240
9QWT|1|A2|G|241
9QWT|1|A2|U|242
9QWT|1|A2|A|243
9QWT|1|A2|G|244

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain F2

Large ribosomal subunit protein uL4

Chain S2

Large ribosomal subunit protein uL24